A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21612



Internal ID15833164
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:87117079..87207618hg38UCSC Ensembl
Outerchr10:87115880..87210803hg38UCSC Ensembl
Innerchr10:88876836..88967375hg19UCSC Ensembl
Outerchr10:88875637..88970560hg19UCSC Ensembl
Innerchr10:88866816..88957355hg18UCSC Ensembl
Outerchr10:88865617..88960540hg18UCSC Ensembl
Innerchr10:88866816..88957355hg17UCSC Ensembl
Outerchr10:88865617..88960540hg17UCSC Ensembl
Cytoband10q23.2
Allele length
AssemblyAllele length
hg3894924
hg1994924
hg1894924
hg1794924
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8715
Supporting Variants
SamplesNA18502
Known GenesFAM35A
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21612
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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