A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21565



Internal ID15840803
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr14:19230949..19734066hg38UCSC Ensembl
Outerchr14:19230949..19734476hg38UCSC Ensembl
Innerchr14:19802572..20202225hg19UCSC Ensembl
Outerchr14:19796159..20202635hg19UCSC Ensembl
Innerchr14:18872572..19272065hg18UCSC Ensembl
Outerchr14:18866159..19272475hg18UCSC Ensembl
Innerchr14:18872572..19272065hg17UCSC Ensembl
Outerchr14:18866159..19272475hg17UCSC Ensembl
Cytoband14q11.1
Allele length
AssemblyAllele length
hg38503528
hg19406477
hg18406317
hg17406317
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9117
Supporting Variants
SamplesNA18980
Known GenesBMS1P17, BMS1P18, OR11H2, POTEM
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21565
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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