A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21541



Internal ID15844777
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:54165740..54261760hg38UCSC Ensembl
Outerchr10:54043346..54262852hg38UCSC Ensembl
Innerchr10:55925500..56021520hg19UCSC Ensembl
Outerchr10:55803106..56022612hg19UCSC Ensembl
Innerchr10:55595506..55691526hg18UCSC Ensembl
Outerchr10:55473112..55692618hg18UCSC Ensembl
Innerchr10:55595506..55691526hg17UCSC Ensembl
Outerchr10:55473112..55692618hg17UCSC Ensembl
Cytoband10q21.1
Allele length
AssemblyAllele length
hg38219507
hg19219507
hg18219507
hg17219507
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8667
Supporting Variants
SamplesNA19240
Known GenesPCDH15
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21541
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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