A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21470



Internal ID15837790
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:19994402..20028557hg38UCSC Ensembl
Outerchr15:19992945..20043238hg38UCSC Ensembl
Innerchr15:20199655..20233810hg19UCSC Ensembl
Outerchr15:20198198..20248491hg19UCSC Ensembl
Innerchr15:18459669..18493824hg18UCSC Ensembl
Outerchr15:18458212..18508505hg18UCSC Ensembl
Innerchr15:18459669..18493824hg17UCSC Ensembl
Outerchr15:18458212..18508505hg17UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg3850294
hg1950294
hg1850294
hg1750294
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA18853
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21470
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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