A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21346



Internal ID15835539
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20441694..20443799hg38UCSC Ensembl
Outerchr15:20441106..20444184hg38UCSC Ensembl
Innerchr15:20646947..20649052hg19UCSC Ensembl
Outerchr15:20646359..20649437hg19UCSC Ensembl
Innerchr15:18906961..18909066hg18UCSC Ensembl
Outerchr15:18906373..18909451hg18UCSC Ensembl
Innerchr15:18906961..18909066hg17UCSC Ensembl
Outerchr15:18906373..18909451hg17UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg383079
hg193079
hg183079
hg173079
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA18552
Known GenesHERC2P3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21346
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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