A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21343



Internal ID15833322
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:115727438..115729744hg38UCSC Ensembl
Outerchr10:115725350..115788244hg38UCSC Ensembl
Innerchr10:117486948..117489254hg19UCSC Ensembl
Outerchr10:117484860..117547755hg19UCSC Ensembl
Innerchr10:117476938..117479244hg18UCSC Ensembl
Outerchr10:117474850..117537745hg18UCSC Ensembl
Innerchr10:117476938..117479244hg17UCSC Ensembl
Outerchr10:117474850..117537745hg17UCSC Ensembl
Cytoband10q25.3
Allele length
AssemblyAllele length
hg3862895
hg1962896
hg1862896
hg1762896
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8727
Supporting Variants
SamplesNA18504
Known GenesATRNL1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21343
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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