A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21322



Internal ID15492333
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:32651571..32687839hg38UCSC Ensembl
Outerchr16:32651316..32687902hg38UCSC Ensembl
Innerchr16:32662892..32699160hg19UCSC Ensembl
Outerchr16:32662637..32699223hg19UCSC Ensembl
Innerchr16:32570393..32606661hg18UCSC Ensembl
Outerchr16:32570138..32606724hg18UCSC Ensembl
Innerchr16:32570393..32606661hg17UCSC Ensembl
Outerchr16:32570138..32606724hg17UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg3836587
hg1936587
hg1836587
hg1736587
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9439
Supporting Variants
SamplesNA18942
Known GenesTP53TG3, TP53TG3B, TP53TG3C
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21322
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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