A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21262



Internal ID15492011
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:32241586..32260538hg38UCSC Ensembl
Outerchr16:32241524..32261246hg38UCSC Ensembl
Innerchr16:32252907..32271859hg19UCSC Ensembl
Outerchr16:32252845..32272567hg19UCSC Ensembl
Innerchr16:32160408..32179360hg18UCSC Ensembl
Outerchr16:32160346..32180068hg18UCSC Ensembl
Innerchr16:32160408..32179360hg17UCSC Ensembl
Outerchr16:32160346..32180068hg17UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg3819723
hg1919723
hg1819723
hg1719723
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9439
Supporting Variants
SamplesNA18942
Known GenesTP53TG3D
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21262
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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