A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21246



Internal ID15829761
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:22061102..22125121hg38UCSC Ensembl
Outerchr15:22060023..22125835hg38UCSC Ensembl
Innerchr15:22349053..22413072hg19UCSC Ensembl
Outerchr15:22347974..22413786hg19UCSC Ensembl
Innerchr15:19850417..19914436hg18UCSC Ensembl
Outerchr15:19849338..19915150hg18UCSC Ensembl
Innerchr15:19850417..19914436hg17UCSC Ensembl
Outerchr15:19849338..19915150hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg3865813
hg1965813
hg1865813
hg1765813
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA10863
Known GenesLOC727924, OR4M2, OR4N3P, OR4N4
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21246
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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