A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv21054



Internal ID15840238
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20455341..20456791hg38UCSC Ensembl
Outerchr15:20454844..20457141hg38UCSC Ensembl
Innerchr15:20660594..20662044hg19UCSC Ensembl
Outerchr15:20660097..20662394hg19UCSC Ensembl
Innerchr15:18920608..18922058hg18UCSC Ensembl
Outerchr15:18920111..18922408hg18UCSC Ensembl
Innerchr15:18920608..18922058hg17UCSC Ensembl
Outerchr15:18920111..18922408hg17UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg382298
hg192298
hg182298
hg172298
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA18975
Known GenesHERC2P3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv21054
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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