A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv20881



Internal ID15844710
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:46382161..46383050hg38UCSC Ensembl
Outerchr10:46381720..46383543hg38UCSC Ensembl
Innerchr10:47753420..47754309hg19UCSC Ensembl
Outerchr10:47752979..47754802hg19UCSC Ensembl
Innerchr10:47223426..47224315hg18UCSC Ensembl
Outerchr10:47222985..47224808hg18UCSC Ensembl
Innerchr10:47223426..47224315hg17UCSC Ensembl
Outerchr10:47222985..47224808hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg381824
hg191824
hg181824
hg171824
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA19240
Known GenesANXA8L1, ANXA8L2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv20881
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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