A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv20705



Internal ID15828912
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:90116564..90118291hg38UCSC Ensembl
Outerchr16:90116547..90118424hg38UCSC Ensembl
Innerchr16:90182972..90184699hg19UCSC Ensembl
Outerchr16:90182955..90184832hg19UCSC Ensembl
Innerchr16:88710473..88712200hg18UCSC Ensembl
Outerchr16:88710456..88712333hg18UCSC Ensembl
Innerchr16:88710473..88712200hg17UCSC Ensembl
Outerchr16:88710456..88712333hg17UCSC Ensembl
Cytoband16q24.3
Allele length
AssemblyAllele length
hg381878
hg191878
hg181878
hg171878
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9483
Supporting Variants
SamplesNA10847
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv20705
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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