A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv20701



Internal ID15844693
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:46332711..46361058hg38UCSC Ensembl
Outerchr10:46332711..46361125hg38UCSC Ensembl
Innerchr10:47189722..47220767hg19UCSC Ensembl
Outerchr10:47189655..47222186hg19UCSC Ensembl
Innerchr10:46609728..46640773hg18UCSC Ensembl
Outerchr10:46609661..46642192hg18UCSC Ensembl
Innerchr10:46609728..46640773hg17UCSC Ensembl
Outerchr10:46609661..46642192hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg3828415
hg1932532
hg1832532
hg1732532
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA19240
Known GenesAGAP9
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv20701
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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