A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv20672



Internal ID15827578
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:22050579..22054635hg38UCSC Ensembl
Outerchr15:22047671..22054980hg38UCSC Ensembl
Innerchr15:22338530..22342586hg19UCSC Ensembl
Outerchr15:22335622..22342931hg19UCSC Ensembl
Innerchr15:19839894..19843950hg18UCSC Ensembl
Outerchr15:19836986..19844295hg18UCSC Ensembl
Innerchr15:19839894..19843950hg17UCSC Ensembl
Outerchr15:19836986..19844295hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg387310
hg197310
hg187310
hg177310
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA07029
Known GenesLOC727924
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv20672
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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