A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv20647



Internal ID15830013
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:5821880..5822471hg38UCSC Ensembl
Outerchr11:5821509..5823136hg38UCSC Ensembl
Innerchr11:5843110..5843701hg19UCSC Ensembl
Outerchr11:5842739..5844366hg19UCSC Ensembl
Innerchr11:5799686..5800277hg18UCSC Ensembl
Outerchr11:5799315..5800942hg18UCSC Ensembl
Innerchr11:5799686..5800277hg17UCSC Ensembl
Outerchr11:5799315..5800942hg17UCSC Ensembl
Cytoband11p15.4
Allele length
AssemblyAllele length
hg381628
hg191628
hg181628
hg171628
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8785
Supporting Variants
SamplesNA11830
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv20647
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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