A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv20552



Internal ID15827529
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20626192..20828223hg38UCSC Ensembl
Outerchr15:20625069..20828285hg38UCSC Ensembl
Innerchr15:20831495..21033552hg19UCSC Ensembl
Outerchr15:20830372..21033614hg19UCSC Ensembl
Innerchr15:19091509..19293604hg18UCSC Ensembl
Outerchr15:19090386..19294239hg18UCSC Ensembl
Innerchr15:19091509..19293604hg17UCSC Ensembl
Outerchr15:19090386..19294239hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg38203217
hg19203243
hg18203854
hg17203854
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA07029
Known GenesCXADRP2, LOC646214, NBEAP1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv20552
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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