A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv20543



Internal ID15492801
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:38545026..38562451hg38UCSC Ensembl
Outerchr9:38544049..38567081hg38UCSC Ensembl
Innerchr9:38545023..38562448hg19UCSC Ensembl
Outerchr9:38544046..38567078hg19UCSC Ensembl
Innerchr9:38535023..38552448hg18UCSC Ensembl
Outerchr9:38534046..38557078hg18UCSC Ensembl
Innerchr9:38535023..38552448hg17UCSC Ensembl
Outerchr9:38534046..38557078hg17UCSC Ensembl
Cytoband9p13.1
Allele length
AssemblyAllele length
hg3823033
hg1923033
hg1823033
hg1723033
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8445
Supporting Variants
SamplesNA18972
Known GenesFAM95C
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv20543
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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