A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv20542



Internal ID15838700
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:31458244..31459784hg38UCSC Ensembl
Outerchr15:31457483..31460796hg38UCSC Ensembl
Innerchr15:31750447..31751987hg19UCSC Ensembl
Outerchr15:31749686..31752999hg19UCSC Ensembl
Innerchr15:29537739..29539279hg18UCSC Ensembl
Outerchr15:29536978..29540291hg18UCSC Ensembl
Innerchr15:29537739..29539279hg17UCSC Ensembl
Outerchr15:29536978..29540291hg17UCSC Ensembl
Cytoband15q13.3
Allele length
AssemblyAllele length
hg383314
hg193314
hg183314
hg173314
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9233
Supporting Variants
SamplesNA18942
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv20542
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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