A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv20526



Internal ID15829516
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr13:18872540..18873878hg38UCSC Ensembl
Outerchr13:18871771..18874305hg38UCSC Ensembl
Innerchr13:19446680..19448018hg19UCSC Ensembl
Outerchr13:19445911..19448445hg19UCSC Ensembl
Innerchr13:18344680..18346018hg18UCSC Ensembl
Outerchr13:18343911..18346445hg18UCSC Ensembl
Innerchr13:18344680..18346018hg17UCSC Ensembl
Outerchr13:18343911..18346445hg17UCSC Ensembl
Cytoband13q11
Allele length
AssemblyAllele length
hg382535
hg192535
hg182535
hg172535
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9054
Supporting Variants
SamplesNA10863
Known GenesANKRD20A9P
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv20526
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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