A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv20522



Internal ID15827510
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20517298..20517492hg38UCSC Ensembl
Outerchr15:20517102..20517714hg38UCSC Ensembl
Innerchr15:20722538..20722732hg19UCSC Ensembl
Outerchr15:20722342..20722954hg19UCSC Ensembl
Innerchr15:18982552..18982746hg18UCSC Ensembl
Outerchr15:18982356..18982968hg18UCSC Ensembl
Innerchr15:18982552..18982746hg17UCSC Ensembl
Outerchr15:18982356..18982968hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg38613
hg19613
hg18613
hg17613
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA07029
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv20522
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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