A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv20492



Internal ID15827506
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:19974265..19992945hg38UCSC Ensembl
Outerchr15:19973778..19994402hg38UCSC Ensembl
Innerchr15:20179518..20198198hg19UCSC Ensembl
Outerchr15:20179031..20199655hg19UCSC Ensembl
Innerchr15:18439532..18458212hg18UCSC Ensembl
Outerchr15:18439045..18459669hg18UCSC Ensembl
Innerchr15:18439532..18458212hg17UCSC Ensembl
Outerchr15:18439045..18459669hg17UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg3820625
hg1920625
hg1820625
hg1720625
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA07029
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv20492
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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