A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv20464



Internal ID15828679
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr12:8219735..8225791hg38UCSC Ensembl
Outerchr12:8218511..8227183hg38UCSC Ensembl
Innerchr12:8372331..8378387hg19UCSC Ensembl
Outerchr12:8371107..8379779hg19UCSC Ensembl
Innerchr12:8263598..8269654hg18UCSC Ensembl
Outerchr12:8262374..8271046hg18UCSC Ensembl
Innerchr12:8263598..8269654hg17UCSC Ensembl
Outerchr12:8262374..8271046hg17UCSC Ensembl
Cytoband12p13.31
Allele length
AssemblyAllele length
hg388673
hg198673
hg188673
hg178673
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8899
Supporting Variants
SamplesNA10839
Known GenesFAM90A1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv20464
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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