A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv20401



Internal ID15844661
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:42832621..42859008hg38UCSC Ensembl
Outerchr10:42831895..42859486hg38UCSC Ensembl
Innerchr10:43328069..43354456hg19UCSC Ensembl
Outerchr10:43327343..43354934hg19UCSC Ensembl
Innerchr10:42648075..42674462hg18UCSC Ensembl
Outerchr10:42647349..42674940hg18UCSC Ensembl
Innerchr10:42648075..42674462hg17UCSC Ensembl
Outerchr10:42647349..42674940hg17UCSC Ensembl
Cytoband10q11.21
Allele length
AssemblyAllele length
hg3827592
hg1927592
hg1827592
hg1727592
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8627
Supporting Variants
SamplesNA19240
Known GenesBMS1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv20401
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer