A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv20398



Internal ID15842382
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:47630057..47630084hg38UCSC Ensembl
Outerchr10:47629589..47630217hg38UCSC Ensembl
Innerchr10:49029030..49029057hg19UCSC Ensembl
Outerchr10:49028562..49029190hg19UCSC Ensembl
Innerchr10:48649036..48649063hg18UCSC Ensembl
Outerchr10:48648568..48649196hg18UCSC Ensembl
Innerchr10:48649036..48649063hg17UCSC Ensembl
Outerchr10:48648568..48649196hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg38629
hg19629
hg18629
hg17629
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA19144
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv20398
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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