A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv20320



Internal ID15485236
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:32232902..32281597hg38UCSC Ensembl
Outerchr16:32231235..32281859hg38UCSC Ensembl
Innerchr16:32244223..32292918hg19UCSC Ensembl
Outerchr16:32242556..32293180hg19UCSC Ensembl
Innerchr16:32151724..32200419hg18UCSC Ensembl
Outerchr16:32150057..32200681hg18UCSC Ensembl
Innerchr16:32151724..32200419hg17UCSC Ensembl
Outerchr16:32150057..32200681hg17UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg3850625
hg1950625
hg1850625
hg1750625
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9439
Supporting Variants
SamplesNA12802
Known GenesTP53TG3D
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv20320
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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