A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv20201



Internal ID15485807
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:34390365..34583832hg38UCSC Ensembl
Outerchr15:34389570..34585041hg38UCSC Ensembl
Innerchr15:34682566..34876033hg19UCSC Ensembl
Outerchr15:34681771..34877242hg19UCSC Ensembl
Innerchr15:32469858..32663325hg18UCSC Ensembl
Outerchr15:32469063..32664534hg18UCSC Ensembl
Innerchr15:32469858..32663325hg17UCSC Ensembl
Outerchr15:32469063..32664534hg17UCSC Ensembl
Cytoband15q14
Allele length
AssemblyAllele length
hg38195472
hg19195472
hg18195472
hg17195472
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9241
Supporting Variants
SamplesNA12872
Known GenesGOLGA8A, GOLGA8B, MIR1233-1, MIR1233-2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv20201
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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