A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv20197



Internal ID15830054
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:87117889..87198551hg38UCSC Ensembl
Outerchr10:87117480..87199165hg38UCSC Ensembl
Innerchr10:88877646..88958308hg19UCSC Ensembl
Outerchr10:88877237..88958922hg19UCSC Ensembl
Innerchr10:88867626..88948288hg18UCSC Ensembl
Outerchr10:88867217..88948902hg18UCSC Ensembl
Innerchr10:88867626..88948288hg17UCSC Ensembl
Outerchr10:88867217..88948902hg17UCSC Ensembl
Cytoband10q23.2
Allele length
AssemblyAllele length
hg3881686
hg1981686
hg1881686
hg1781686
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8715
Supporting Variants
SamplesNA11830
Known GenesFAM35A
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv20197
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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