A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv20155



Internal ID15840539
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:34199616..34204128hg38UCSC Ensembl
Outerchr11:34199007..34204822hg38UCSC Ensembl
Innerchr11:34221163..34225675hg19UCSC Ensembl
Outerchr11:34220554..34226369hg19UCSC Ensembl
Innerchr11:34177739..34182251hg18UCSC Ensembl
Outerchr11:34177130..34182945hg18UCSC Ensembl
Innerchr11:34177739..34182251hg17UCSC Ensembl
Outerchr11:34177130..34182945hg17UCSC Ensembl
Cytoband11p13
Allele length
AssemblyAllele length
hg385816
hg195816
hg185816
hg175816
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8806
Supporting Variants
SamplesNA18980
Known GenesABTB2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv20155
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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