A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv20105



Internal ID15828885
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:101876190..101877926hg38UCSC Ensembl
Outerchr15:101875981..101879563hg38UCSC Ensembl
Innerchr15:102416393..102418129hg19UCSC Ensembl
Outerchr15:102416184..102419766hg19UCSC Ensembl
Innerchr15:100233916..100235652hg18UCSC Ensembl
Outerchr15:100233707..100237289hg18UCSC Ensembl
Innerchr15:100233916..100235652hg17UCSC Ensembl
Outerchr15:100233707..100237289hg17UCSC Ensembl
Cytoband15q26.3
Allele length
AssemblyAllele length
hg383583
hg193583
hg183583
hg173583
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9315
Supporting Variants
SamplesNA10847
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv20105
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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