A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv20019



Internal ID15484463
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:133642657..133644362hg38UCSC Ensembl
Outerchr10:133642277..133646113hg38UCSC Ensembl
Innerchr10:135456161..135457866hg19UCSC Ensembl
Outerchr10:135455781..135459617hg19UCSC Ensembl
Innerchr10:135306151..135307856hg18UCSC Ensembl
Outerchr10:135305771..135309607hg18UCSC Ensembl
Innerchr10:135345042..135346747hg17UCSC Ensembl
Outerchr10:135344662..135348498hg17UCSC Ensembl
Cytoband10q26.3
Allele length
AssemblyAllele length
hg383837
hg193837
hg183837
hg173837
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8752
Supporting Variants
SamplesNA12740
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv20019
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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