A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv20008



Internal ID15842402
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:82271726..82272271hg38UCSC Ensembl
Outerchr9:82270494..82272747hg38UCSC Ensembl
Innerchr9:84886641..84887186hg19UCSC Ensembl
Outerchr9:84885409..84887662hg19UCSC Ensembl
Innerchr9:84076461..84077006hg18UCSC Ensembl
Outerchr9:84075229..84077482hg18UCSC Ensembl
Innerchr9:82116195..82116740hg17UCSC Ensembl
Outerchr9:82114963..82117216hg17UCSC Ensembl
Cytoband9q21.32
Allele length
AssemblyAllele length
hg382254
hg192254
hg182254
hg172254
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8538
Supporting Variants
SamplesNA19144
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv20008
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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