A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19977



Internal ID15495370
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:21524..42902hg38UCSC Ensembl
Outerchr9:21177..45316hg38UCSC Ensembl
Innerchr9:21524..42902hg19UCSC Ensembl
Outerchr9:21177..45316hg19UCSC Ensembl
Innerchr9:11524..32902hg18UCSC Ensembl
Outerchr9:11177..35316hg18UCSC Ensembl
Innerchr9:11524..32902hg17UCSC Ensembl
Outerchr9:11177..35316hg17UCSC Ensembl
Cytoband9p24.3
Allele length
AssemblyAllele length
hg3824140
hg1924140
hg1824140
hg1724140
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8400
Supporting Variants
SamplesNA19132
Known GenesFAM138C, WASH1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19977
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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