A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19975



Internal ID15840577
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:5871366..5913883hg38UCSC Ensembl
Outerchr11:5862146..5914396hg38UCSC Ensembl
Innerchr11:5892596..5935113hg19UCSC Ensembl
Outerchr11:5883376..5935626hg19UCSC Ensembl
Innerchr11:5849172..5891689hg18UCSC Ensembl
Outerchr11:5839952..5892202hg18UCSC Ensembl
Innerchr11:5849172..5891689hg17UCSC Ensembl
Outerchr11:5839952..5892202hg17UCSC Ensembl
Cytoband11p15.4
Allele length
AssemblyAllele length
hg3852251
hg1952251
hg1852251
hg1752251
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8786
Supporting Variants
SamplesNA18980
Known GenesOR52E4
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19975
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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