A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19969



Internal ID15490588
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:32403870..32435152hg38UCSC Ensembl
Outerchr15:32403495..32437887hg38UCSC Ensembl
Innerchr15:32696071..32727353hg19UCSC Ensembl
Outerchr15:32695696..32730088hg19UCSC Ensembl
Innerchr15:30483363..30514645hg18UCSC Ensembl
Outerchr15:30482988..30517380hg18UCSC Ensembl
Innerchr15:30483363..30514645hg17UCSC Ensembl
Outerchr15:30482988..30517380hg17UCSC Ensembl
Cytoband15q13.3
Allele length
AssemblyAllele length
hg3834393
hg1934393
hg1834393
hg1734393
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9238
Supporting Variants
SamplesNA18572
Known GenesULK4P1, ULK4P2, ULK4P3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19969
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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