A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19939



Internal ID15490283
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:30572450..30602057hg38UCSC Ensembl
Outerchr15:30571547..30603823hg38UCSC Ensembl
Innerchr15:30864653..30894260hg19UCSC Ensembl
Outerchr15:30863750..30896026hg19UCSC Ensembl
Innerchr15:28651945..28681552hg18UCSC Ensembl
Outerchr15:28651042..28683318hg18UCSC Ensembl
Innerchr15:28651945..28681552hg17UCSC Ensembl
Outerchr15:28651042..28683318hg17UCSC Ensembl
Cytoband15q13.2
Allele length
AssemblyAllele length
hg3832277
hg1932277
hg1832277
hg1732277
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9232
Supporting Variants
SamplesNA18572
Known GenesULK4P1, ULK4P2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19939
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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