A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19909



Internal ID15490399
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:30377895..30393816hg38UCSC Ensembl
Outerchr15:30377331..30394693hg38UCSC Ensembl
Innerchr15:30670098..30686019hg19UCSC Ensembl
Outerchr15:30669534..30686896hg19UCSC Ensembl
Innerchr15:28457390..28473311hg18UCSC Ensembl
Outerchr15:28456826..28474188hg18UCSC Ensembl
Innerchr15:28457390..28473311hg17UCSC Ensembl
Outerchr15:28456826..28474188hg17UCSC Ensembl
Cytoband15q13.2
Allele length
AssemblyAllele length
hg3817363
hg1917363
hg1817363
hg1717363
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9232
Supporting Variants
SamplesNA18572
Known GenesCHRFAM7A
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19909
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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