A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19895



Internal ID15482409
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:82361689..82372205hg38UCSC Ensembl
Outerchr15:82359429..82373586hg38UCSC Ensembl
Innerchr15:82653917..82664409hg19UCSC Ensembl
Outerchr15:82651648..82665789hg19UCSC Ensembl
Innerchr15:80440972..80451464hg18UCSC Ensembl
Outerchr15:80438703..80452844hg18UCSC Ensembl
Innerchr15:80440972..80451464hg17UCSC Ensembl
Outerchr15:80438703..80452844hg17UCSC Ensembl
Cytoband15q25.2
Allele length
AssemblyAllele length
hg3814158
hg1914142
hg1814142
hg1714142
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9284
Supporting Variants
SamplesNA10847
Known GenesUBE2Q2P2, UBE2Q2P3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19895
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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