A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19868



Internal ID15830964
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:46561417..46567043hg38UCSC Ensembl
Outerchr10:46560751..46567464hg38UCSC Ensembl
Innerchr10:46982574..46988200hg19UCSC Ensembl
Outerchr10:46982153..46988866hg19UCSC Ensembl
Innerchr10:46402580..46408206hg18UCSC Ensembl
Outerchr10:46402159..46408872hg18UCSC Ensembl
Innerchr10:46402580..46408206hg17UCSC Ensembl
Outerchr10:46402159..46408872hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg386714
hg196714
hg186714
hg176714
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA12155
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19868
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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