A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19838



Internal ID15830962
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:46709974..46712947hg38UCSC Ensembl
Outerchr10:46709801..46713156hg38UCSC Ensembl
Innerchr10:46836670..46839643hg19UCSC Ensembl
Outerchr10:46836461..46839816hg19UCSC Ensembl
Innerchr10:46256676..46259649hg18UCSC Ensembl
Outerchr10:46256467..46259822hg18UCSC Ensembl
Innerchr10:46256676..46259649hg17UCSC Ensembl
Outerchr10:46256467..46259822hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg383356
hg193356
hg183356
hg173356
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA12155
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19838
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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