A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19779



Internal ID15831084
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:87223398..87223543hg38UCSC Ensembl
Outerchr10:87222087..87223844hg38UCSC Ensembl
Innerchr10:88983155..88983300hg19UCSC Ensembl
Outerchr10:88981844..88983601hg19UCSC Ensembl
Innerchr10:88973135..88973280hg18UCSC Ensembl
Outerchr10:88971824..88973581hg18UCSC Ensembl
Innerchr10:88973135..88973280hg17UCSC Ensembl
Outerchr10:88971824..88973581hg17UCSC Ensembl
Cytoband10q23.2
Allele length
AssemblyAllele length
hg381758
hg191758
hg181758
hg171758
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8715
Supporting Variants
SamplesNA12740
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19779
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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