A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19722



Internal ID15486154
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:38409009..38499491hg38UCSC Ensembl
Outerchr9:38283618..38500021hg38UCSC Ensembl
Innerchr9:38409006..38499488hg19UCSC Ensembl
Outerchr9:38283615..38500018hg19UCSC Ensembl
Innerchr9:38399006..38489488hg18UCSC Ensembl
Outerchr9:38273615..38490018hg18UCSC Ensembl
Innerchr9:38399006..38489488hg17UCSC Ensembl
Outerchr9:38273615..38490018hg17UCSC Ensembl
Cytoband9p13.1
Allele length
AssemblyAllele length
hg38216404
hg19216404
hg18216404
hg17216404
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8445
Supporting Variants
SamplesNA18502
Known GenesALDH1B1, IGFBPL1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19722
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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