A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19649



Internal ID15843212
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:87117480..87184587hg38UCSC Ensembl
Outerchr10:87117079..87186173hg38UCSC Ensembl
Innerchr10:88877237..88944344hg19UCSC Ensembl
Outerchr10:88876836..88945930hg19UCSC Ensembl
Innerchr10:88867217..88934324hg18UCSC Ensembl
Outerchr10:88866816..88935910hg18UCSC Ensembl
Innerchr10:88867217..88934324hg17UCSC Ensembl
Outerchr10:88866816..88935910hg17UCSC Ensembl
Cytoband10q23.2
Allele length
AssemblyAllele length
hg3869095
hg1969095
hg1869095
hg1769095
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8715
Supporting Variants
SamplesNA19173
Known GenesFAM35A
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19649
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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