A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19639



Internal ID15837286
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:21977969..22003586hg38UCSC Ensembl
Outerchr15:21976358..22005780hg38UCSC Ensembl
Innerchr15:22265920..22291537hg19UCSC Ensembl
Outerchr15:22264309..22293731hg19UCSC Ensembl
Innerchr15:19767284..19792901hg18UCSC Ensembl
Outerchr15:19765673..19795095hg18UCSC Ensembl
Innerchr15:19767284..19792901hg17UCSC Ensembl
Outerchr15:19765673..19795095hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg3829423
hg1929423
hg1829423
hg1729423
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA18572
Known GenesLOC727924
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19639
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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