A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19609



Internal ID15836881
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20869689..20990595hg38UCSC Ensembl
Outerchr15:20868224..20991208hg38UCSC Ensembl
Innerchr15:21075018..21195924hg19UCSC Ensembl
Outerchr15:21073553..21196537hg19UCSC Ensembl
Innerchr15:19339675..19460583hg18UCSC Ensembl
Outerchr15:19338211..19461196hg18UCSC Ensembl
Innerchr15:19339675..19460583hg17UCSC Ensembl
Outerchr15:19338211..19461196hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg38122985
hg19122985
hg18122986
hg17122986
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA18572
Known GenesCT60, NF1P2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19609
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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