A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19602



Internal ID15485860
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:21832757..22036475hg38UCSC Ensembl
Outerchr9:21763811..22176201hg38UCSC Ensembl
Innerchr9:21832756..22036474hg19UCSC Ensembl
Outerchr9:21763810..22176200hg19UCSC Ensembl
Innerchr9:21822756..22026474hg18UCSC Ensembl
Outerchr9:21753810..22166200hg18UCSC Ensembl
Innerchr9:21822756..22026474hg17UCSC Ensembl
Outerchr9:21753810..22166200hg17UCSC Ensembl
Cytoband9p21.3
Allele length
AssemblyAllele length
hg38412391
hg19412391
hg18412391
hg17412391
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8426
Supporting Variants
SamplesNA18502
Known GenesC9orf53, CDKN2A, CDKN2B, CDKN2B-AS1, MTAP
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19602
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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