A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19559



Internal ID15843201
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:47619590..47696741hg38UCSC Ensembl
Outerchr10:47619087..47697486hg38UCSC Ensembl
Innerchr10:49018547..49094746hg19UCSC Ensembl
Outerchr10:49018044..49095491hg19UCSC Ensembl
Innerchr10:48638553..48714752hg18UCSC Ensembl
Outerchr10:48638050..48715497hg18UCSC Ensembl
Innerchr10:48638553..48714752hg17UCSC Ensembl
Outerchr10:48638050..48715497hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg3878400
hg1977448
hg1877448
hg1777448
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA19173
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19559
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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