A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19529



Internal ID15843196
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:47568360..47591108hg38UCSC Ensembl
Outerchr10:47567886..47591859hg38UCSC Ensembl
Innerchr10:48967291..48990051hg19UCSC Ensembl
Outerchr10:48966811..48990802hg19UCSC Ensembl
Innerchr10:48587297..48610057hg18UCSC Ensembl
Outerchr10:48586817..48610808hg18UCSC Ensembl
Innerchr10:48587297..48610057hg17UCSC Ensembl
Outerchr10:48586817..48610808hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg3823974
hg1923992
hg1823992
hg1723992
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA19173
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19529
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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