A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19525



Internal ID15840525
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:87473138..87481701hg38UCSC Ensembl
Outerchr10:87469689..87482626hg38UCSC Ensembl
Innerchr10:89232895..89241458hg19UCSC Ensembl
Outerchr10:89229446..89242383hg19UCSC Ensembl
Innerchr10:89222875..89231438hg18UCSC Ensembl
Outerchr10:89219426..89232363hg18UCSC Ensembl
Innerchr10:89222875..89231438hg17UCSC Ensembl
Outerchr10:89219426..89232363hg17UCSC Ensembl
Cytoband10q23.2
Allele length
AssemblyAllele length
hg3812938
hg1912938
hg1812938
hg1712938
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8721
Supporting Variants
SamplesNA18980
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19525
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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