A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19474



Internal ID15828263
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:87117079..87212664hg38UCSC Ensembl
Outerchr10:87115880..87213496hg38UCSC Ensembl
Innerchr10:88876836..88972421hg19UCSC Ensembl
Outerchr10:88875637..88973253hg19UCSC Ensembl
Innerchr10:88866816..88962401hg18UCSC Ensembl
Outerchr10:88865617..88963233hg18UCSC Ensembl
Innerchr10:88866816..88962401hg17UCSC Ensembl
Outerchr10:88865617..88963233hg17UCSC Ensembl
Cytoband10q23.2
Allele length
AssemblyAllele length
hg3897617
hg1997617
hg1897617
hg1797617
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8715
Supporting Variants
SamplesNA10839
Known GenesFAM35A
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19474
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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