A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv19465



Internal ID15840499
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:87260126..87264835hg38UCSC Ensembl
Outerchr10:87256789..87268284hg38UCSC Ensembl
Innerchr10:89019883..89024592hg19UCSC Ensembl
Outerchr10:89016546..89028041hg19UCSC Ensembl
Innerchr10:89009863..89014572hg18UCSC Ensembl
Outerchr10:89006526..89018021hg18UCSC Ensembl
Innerchr10:89009863..89014572hg17UCSC Ensembl
Outerchr10:89006526..89018021hg17UCSC Ensembl
Cytoband10q23.2
Allele length
AssemblyAllele length
hg3811496
hg1911496
hg1811496
hg1711496
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8715
Supporting Variants
SamplesNA18980
Known GenesNUTM2A-AS1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv19465
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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